Resource data
Inferring the Evolutionary History of Vibrios by Means of Multilocus Sequence Analysis
Sawabe, Tomoo Kita-Tsukamoto, Kumiko Thompson, Fabiano L.
Location:
http://hdl.handle.net/2115/30288
Journal of Bacteriology. 189(21), 2007, 7932-7936
http://dx.doi.org/10.1128/JB.00693-07
We performed the first broad study aiming at the reconstruction of the evolutionary history of vibrios by means of multilocus sequence analysis of nine genes. Overall, 14 distinct clades were recognized using the SplitsTree decomposition method. Some of these clades may correspond to families, e.g., the clades Salinivibrio and Photobacteria, while other clades, e.g., Splendidus and Harveyi, correspond to genera. The common ancestor of all vibrios was estimated to have been present 600 million years ago. We can define species of vibrios as groups of strains that share >95% gene sequence similarity and >99.4% amino acid identity based on the eight protein-coding housekeeping genes. The gene sequence data were used to refine the standard online electronic taxonomic scheme for vibrios (http://www.taxvibrio.lncc.br).
Belongs to: Hokkaido University Collection of Scholarly and Academic Papers
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Detalles del recurso
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Inferring the Evolutionary History of Vibrios by Means of Multilocus Sequence Analysis
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| Id. |
30222041 |
| Idioma |
inglés
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| Titulo |
Inferring the Evolutionary History of Vibrios by Means of Multilocus Sequence Analysis |
| Autor(es) |
Sawabe, Tomoo Kita-Tsukamoto, Kumiko Thompson, Fabiano L. |
| Location |
http://hdl.handle.net/2115/30288
Journal of Bacteriology. 189(21), 2007, 7932-7936
http://dx.doi.org/10.1128/JB.00693-07
|
| Versión |
1.0 |
| Estado |
Final
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| Descripción |
We performed the first broad study aiming at the reconstruction of the evolutionary history of vibrios by means of multilocus sequence analysis of nine genes. Overall, 14 distinct clades were recognized using the SplitsTree decomposition method. Some of these clades may correspond to families, e.g., the clades Salinivibrio and Photobacteria, while other clades, e.g., Splendidus and Harveyi, correspond to genera. The common ancestor of all vibrios was estimated to have been present 600 million years ago. We can define species of vibrios as groups of strains that share >95% gene sequence similarity and >99.4% amino acid identity based on the eight protein-coding housekeeping genes. The gene sequence data were used to refine the standard online electronic taxonomic scheme for vibrios (http://www.taxvibrio.lncc.br). |
| Palabras clave |
465 |
| Tipo de recurso |
article
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| Tipo de Interactividad |
Expositivo
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| Nivel de Interactividad |
muy bajo
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| Audiencia |
Estudiante
Profesor
Autor
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| Estructura |
Atomic |
| Coste |
no
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| Copyright |
sí
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Copyright © American Society for Microbiology |
| Requerimientos técnicos |
Browser: Any |
| Fecha de contribución |
27-dic-2007 |
| Contacto |
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