CONSERV: A Tool for Finding Exact Matching Conserved Sequences in Biological Sequences
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CONSERV: A Tool for Finding Exact Matching Conserved Sequences in Biological Sequences
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| Id. |
41893332 |
| Idioma |
inglés
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| Titulo |
CONSERV: A Tool for Finding Exact Matching Conserved Sequences in Biological Sequences |
| Autor(es) |
Naohisa Goto,Ken Kurokawa,Teruo Yasunaga
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| Localización |
http://citeseer.ist.psu.edu/457827.html
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| Versión |
1.0 |
| Estado |
Final
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| Descripción |
Introduction
Complete genome
sequencesof
more than 30 organisms have been determined today. When many
complete genome sequences become available,
oneof
the first questions is which regions are conserved
among various genome sequences. For the purpose, however, most existing tools are not available
because they can not treat large sequences such as complete genome sequences, or even when they
can treat complete genome sequences, they areof5M too slow.
We have developed asof ware tool CONSERV, which allows us to detect all exactly matching
common regions in two or more complete genome sequences. We can use CONSERVfz not only
nucleic acid sequences but also amino acid sequences. CONSERV can only detect exact matches,
but it is veryfy5P For example, to compute all exact matching common regions longer than 1
bases in Mycoplasma pneumoniae, Chlamydia trachomatis, Archaeoglobus fulgidus, and Esc
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| Tipo |
pdf
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| Palabras clave |
Naohisa Goto,Ken Kurokawa,Teruo Yasunaga CONSERV: A Tool for Finding Exact Matching Conserved Sequences in Biological Sequences
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| Tipo de Interactividad |
Expositivo
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| Nivel de Interactividad |
muy bajo
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| Audiencia |
Estudiante
Profesor
Autor
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| Estructura |
Atomic |
| Coste |
no
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| Copyright |
sí
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unrestricted |
| Formatos |
pdf
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| Requerimientos técnicos |
Browser: Any
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| Relación |
[IsBasedOn] http://www.jsbi.org/journal/GIW00/GIW00P036.pdf
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| Fecha de contribución |
31-mar-2009 |
| Contacto |
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