CONSERV: A Tool for Finding Exact Matching Conserved Sequences in Biological Sequences
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CONSERV: A Tool for Finding Exact Matching Conserved Sequences in Biological Sequences
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| Id. |
46253151 |
| Idioma |
inglés
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| Titulo |
CONSERV: A Tool for Finding Exact Matching Conserved Sequences in Biological Sequences |
| Autor(es) |
Naohisa Goto
Ken Kurokawa
Teruo Yasunaga
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| Localización |
http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.21.4451
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| Versión |
1.0 |
| Estado |
Final
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| Descripción |
Introduction Complete genome sequencesof more than 30 organisms have been determined today. When many complete genome sequences become available, oneof the first questions is which regions are conserved among various genome sequences. For the purpose, however, most existing tools are not available because they can not treat large sequences such as complete genome sequences, or even when they can treat complete genome sequences, they areof5M too slow. We have developed asof ware tool CONSERV, which allows us to detect all exactly matching common regions in two or more complete genome sequences. We can use CONSERVfz not only nucleic acid sequences but also amino acid sequences. CONSERV can only detect exact matches, but it is veryfy5P For example, to compute all exact matching common regions longer than 1 bases in Mycoplasma pneumoniae, Chlamydia trachomatis, Archaeoglobus fulgidus, and Esc
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| Tipo |
application/pdf
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| Palabras clave |
complete genome
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| Tipo de recurso |
Texto Narrativo
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| Tipo de Interactividad |
Expositivo
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| Nivel de Interactividad |
muy bajo
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| Audiencia |
Estudiante
Profesor
Autor
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| Estructura |
Atomic |
| Coste |
no
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| Copyright |
sí
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Metadata may be used without restrictions as long as the oai identifier remains attached to it. |
| Formatos |
application/pdf
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| Requerimientos técnicos |
Browser: Any
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| Relación |
[IsBasedOn] http://www.jsbi.org/journal/GIW00/GIW00P036.pdf
[References] 10.1.1.33.7397
[References] 10.1.1.123.2374
[References] 10.1.1.17.9167
[References] 10.1.1.127.7154
[References] 10.1.1.22.2492
[References] 10.1.1.21.4632
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| Fecha de contribución |
23-jul-2009 |
| Contacto |
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