arXiv
(411,768 recursos)
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102.
Shock waves in virus fitness evolution - Carvalhaes, Fernando G.; Goldman, Carla
We consider a nonlinear partial differential equation of conservation type to
describe the dynamics of vesicular stomatitis virus observed in aliquots of
fixed particle number taken from an evolving clone at periodic intervals of
time \cite{novella 95}.
103.
Master equation approach to the assembly of viral capsids - Keef, T.; Micheletti, C.; Twarock, R.
The distribution of inequivalent geometries occurring during self-assembly of
the major capsid protein in thermodynamic equilibrium is determined based on a
master equation approach.
104.
Assembly Models for Papovaviridae based on Tiling Theory - Keef, T.; Taormina, A.; Twarock, R.
Assembly
models are developed for viral capsids built from protein building blocks that
can assume different local bonding structures in the capsid.
105.
A Modified Iterative IOM Approach for Optimization of Biochemical Systems - Xu, Gongxian; Shao, Cheng; Xiu, Zhilong
The presented previously indirect optimization method (IOM) developed within
biochemical systems theory (BST) provides a versatile and mathematically
tractable optimization strategy for biochemical systems.
106.
Should you believe that this coin is fair? - Bialek, William
Faced with a sequence of N binary events, such as coin flips (or Ising
spins), it is natural to ask whether these events reflect some underlying
dynamic signals or are just random.
108.
Equation of state of looped DNA - Kulic, I. M.; Mohrbach, H.; Thaokar, R.; Schiessel, H.
We calculate the equation of state of DNA under tension for the case that the
DNA features loops.
109.
Networks of Mobile Elements for Biological Systems - Thadani, Kanchan; Ashutosh
In this paper we present a network model to study the impact of spatial
distribution of constituents, coupling between them and diffusive processes in
the context of biological situations.
110.
High resolution protein folding with a transferable potential - Hubner, Isaac A.; Deeds, Eric J.; Shakhnovich, Eugene I.
A generalized computational method for folding proteins with a fully
transferable potential and geometrically realistic all-atom model is presented
and tested on seven different helix bundle proteins.
112.
In silicio stretching of chromatin - Aumann, Frank; Lankas, Filip; Caudron, Maiwen; Langowski, Jörg
The model approximates the DNA by a flexible polymer chain
with Debye-H\"uckel electrostatics and uses a two-angle zig-zag model for the
geometry of the linker DNA connecting the nucleosomes.
114.
Embedded transfer RNA Genes - Ghosh, Zhumur; Das, Smarajit; Chakrabarti, Jayprokas; Mallick, Bibekanand; Sahoo, Satyabrata
equitans some of
the missing tRNA genes are embedded in others.
117.
Some protein interaction data do not exhibit power law statistics - Tanaka, Reiko; Yi, Tau-Mu; Doyle, John
It has been claimed that protein-protein interaction (PPI) networks are
scale-free based on the observation that the node degree sequence follows a
power law.
120.
Age-Associated Disorders As A Proxy Measure Of Biological Age: Findings
From the NLTCS Data - Kulminski, A.; Yashin, A.; Ukraintseva, S.; Akushevich, I.; Arbeev, K.; Land, K.; Manton, K.
Background: The relative contribution of different aging-associated processes
to the age phenotype may differ among individuals, creating variability in
aging manifestations among age-peers.
101.
